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Dr. Pratip Shil

HomeDr. Pratip Shil
HomeDr. Pratip Shil
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DR. PRATIP SHIL

Designation: Scientist E

Division: BIOINFORMATICS AND DATA MANAGEMENT

Educational qualifications: M.Sc(Physics), Ph.D (Physics) Splz. Biophysics

Date of joining ICMR-NIV: :13th July 2009

  • Contact: +91-02026006390
  • Email: shil.p@gov.in
  • Office: Indian Council of Medical Research-National Institute of Virology Pune Maharashtra - 411001

 

Research Interests:

  • Mathematical modelling applications in Virology includeing disease modelling
  • Vlimate effects on viral diseases, vectors and vector-borne diseases
  • Bioinformatics
  • Field trials
  • Outbreak investigations

 

Awards/Honours:

  • Marquis WhosWho In The World 2009, 2010 for unique contributions in electroporation technology - biophysical basis and its applications in cancer therapy.
  • Young Scientist Award 2005. Conferred by Indian Biophysical Society for contributions to electroporation technology based cancer treatment.

 

ORCID ID: 000-0001-6999-3416

Researcher ID: rid20169

Google Scholar Profile Link

 

List of Publications
  • 1.DV Pavitrakar, NM Atre, AS Tripathy, P Shil. Cyclophilin A: a possible host modulator in Chandipura virus infection. Arch Virol. 2021; 166(11):3143-3150.  

  • 2. P Shil, N Atre, A Patil, B Tandale, et al.. District-wise estimation of Basic reproduction number (R0) for COVID-19 in India in the initial phase. Spatial Inform. Res 2021:  doi.org/10.1007/s41324-021-00412-7.

  • 3. S Saunik, P Shil, SN Das, SP Rajankar, O Khare, KA Hosalikar, Y Kabir. "Predictions of Disease Spikes induced by Climate Variability: A pilot real time forecasting model project from Maharashtra, India". Book Chapter. Management of Irrigation and Water Supply Under Climatic Extremes: Empirical Analysis and Policy Lessons from India. Springer International Publishing 2021; pp 229-239.

  • 4. P Shil, R Balasubramanian.  Meteorological Parameters and Mosquito Species Diversity and Abundance along the Arabian Sea Coastline of Alappuzha District, India: A Year-round Study (2017-18). J Mosquito Res 2020;  10: doi:
  • 5. DV Pavitrakar, NM Atre, AS Tripathy, P Shil. Design of a multi-epitope peptide vaccine  candidate against chandipura virus: an immuno-informatics study. J Biomolecular Structure and Dynamics 2020;  1-12. doi:  doi.org/10.1080/07391102.2020.1816493.

  • 6. P Shil, M Jagtap, CRH deSouza, AB Sudeep, P Awate. Climate and dengue in the Pune region: prospects for an early warning system. Dengue Bulletin 2020; 41: 49.   
  • 7. PD Yadav, DA Nyayanit, AM Shete, S Jain, TP Majumdar, GY Chaubal, P Shil, et al. Complete genome sequencing of Kaisodi virus isolated from ticks in India belonging to Phlebovirus genus, family Phenuiviridae.  Ticks and Tick-borne diseases 2019; 10 (1): 23-33.
  • 8. P Shil, Rainfall and dengue occurrences in India during 2010–2016. Biomed. Res. J 2019; 6 (2): 56.
  • 9. AB Sudeep, PB Vyas, D Parashar, P Shil. Differential susceptibility & replication potential of Vero E6, BHK-21, RD, A-549, C6/36 cells & Aedes aegypti mosquitoes to three strains of chikungunya virus. IJMR 2019; 149 (6): 771.

  • 10. AB Sudeep, P Shil, MM Charmode, S Mohandas,  et al. Involvement of dual serotypes during a severe dengue outbreak in Wadi area, Nagpur district, Maharashtra 2017.  J Vector Borne Diseases 2019; 56 (4): 295.

  • 11. P Yadav, G Chaubal, S Jena, P Shil, D Mourya.  Assessment of NS1 protein as an early diagnostic marker for Kyasanur forest disease virus.  J Vector Borne Diseases 2019;  56 (3): 212.

  • 12. P Shil, DR Kothawale, AB Sudeep. Rainfall and Chikungunya incidences in India during 2010–2014. VirusDisease 2018;  29 (1): 46-53.
  • 13. MM Thube, P Shil, R Kasbe, AA Patil, SD Pawar, J Mullick. Differences in Type I interferon response in human lung epithelial cells infected by highly pathogenic H5N1 and low pathogenic H11N1 avian influenza viruses. Virus Genes 2018;  54 (3): 414-423.

  • 14. P Shil, GN Sapkal, AA Patil, SN Gunjal, AB Sudeep.  Meteorological parameters and seasonal variability of mosquito population in Pune Urban Zone, India: A year-round study, 2017. J Mosquito Research 2018; 8(3).
  • 15. P Shil, KB Achary, K Alagarasu. Numerical analyses of electroporation-mediated doxorubicin uptake in eukaryotic cells: role of membrane cholesterol content. Ind J Biochem Biophys  2018; 55(1): 52-61.
  • 16. DV Pavitrakar, RG Damle, AS Tripathy, P Shil. Identification of a conserved neutralizing epitope in the G-protein of Chandipura virus.  Arch. Virol.2018;  163 (12): 3215-3223.

  • 17. P Kumar, A Kshirsagar, P Shil. Estimation of Epidemiological Parameters for Historical Ship Outbreaks of Influenza. Biomed Res J 2018; 5 (1), 28-38.

  • 18. P Shil, PD Yadav, AA Patil, R Balasubramanian, DT Mourya. Bioinformatics characterization of envelope glycoprotein from Kyasanur Forest disease virus.  Indian J Medical Res 2018; 147 (2): 195.

  • 19. K Alagarasu, PS Patil, P Shil, et. al.. In-vitro effect of human cathelicidin antimicrobial peptide LL-37 on dengue virus type 2. Peptides 2017; 92: 23-30.

  • 20. AB Sudeep, P Shil.  Aedes vittatus (Bigot) mosquito: an emerging threat to public health. J Vector borne Dis 2017;  54 (4): 295.

  • 21. YK Gurav, MS Chadha, BV Tandale, VA Potdar, SD Pawar, P Shil, et al. Influenza A (H1N1) pdm09 outbreak detected in inter-seasonal months during the surveillance of influenza-like illness in Pune, India, 2012–2015. Epidemiology & Infection 2017; 145 (9): 1898-1909.

  • 22. P Shil, GN Sapkal, AA Patil, AB Sudeep. Meteorological parameters and mosquito abundance in Pashan area of Pune, India during south west monsoon and post-monsoon seasons in 2016. J Mosquito Res 2017; 7(19): 154-165.

  • 23. P Shil, PB Vidyasagar, KP Mishra. Radio-Electro-Chemotherapy of Cancer: New Perspectives for Cancer Treatment. Book Chapter in "Radiation in Medicine and Biology". Jenny Stanford Publishing 2007; pp 117-128.

  • 24. P Shil. Mathematical Modeling of Viral Epidemics: A Review. Biomed Res J 2016; 3 (2),195–215.

  • 25. DT Mourya, P Shil, GN Sapkal, PD Yadav. Zika virus: Indian perspectives. The Indian J of Med. Res. 2016;  143 (5): 553.

  • 26. R Kulkarni, G Sapkal, L Mahishi, P Shil, MM Gore. Design and characterization of polytope construct with multiple B and TH epitopes of Japanese encephalitis virus. Virus research 166 (1-2), 77-86, 2012.

  • 27. RS Gangwar, P Shil, GN Sapkal, SA Khan, MM Gore. Induction of virus-specific neutralizing immune response against West Nile and Japanese encephalitis viruses by chimeric peptides representing T-helper and B-cell epitopes. Virus research 2012; 163 (1):40-50.

  • 28. RS Gangwar, P Shil, SS Cherian, MM Gore. Delineation of an epitope on domain I of Japanese encephalitis virus Envelope glycoprotein using monoclonal antibodies. Virus Res 2011; 158 (1-2): 179-187.

  • 29. P Shil, SS Chavan, SS Cherian. Antigenic variability in Neuraminidase protein of Influenza A/H3N2 vaccine strains (1968–2009). Bioinformation 2011; 7 (2): 76.

  • 30. P Shil, S Chavan, S Cherian. Molecular basis of antigenic drift in Influenza A/H3N2 strains (1968-2007) in the light of antigen antibody interactions.  Bioinformation 2011; 6 (7): 266.

  • 31. P Shil, YK Gurav, MS Chadha, AC Mishra. Transmission dynamics of novel influenza A/H1N1 2009 outbreak in a residential school in India. Current Science 2011; 100(8):1177-1183.

  • 32. P Shil, S Bidaye, PB Vidyasagar. Analysing the effects of surface distribution of pores in cell electroporation for a cell membrane containing cholesterol. Journal of Physics D: Applied Physics 2008; 41 (5):  055502.

  • 33. P Shil, N Dudani, PB Vidyasagar. ISHAN: sequence homology analysis package. In silico biology 2006; 6 (5): 373-377.

  • 34. P Shil, A Kumar, PB Vidyasagar, KP Mishra. Electroporation enhances radiation and doxorubicin-induced toxicity in solid tumor in vivo. J Environmental Pathology, Toxicology and Oncology 2006; 25(4):625-32. 

  • 35. P Vidyasagar, P Shil, K Mishra. SciM Fri  03: Radio-electro therapy of murine fibrosarcoma: In vivo study. Medical Physics 2005; 32 (7Part2), 2417-2417.

  • 36. PB Vidyasagar, P Shil, et al.  Evolution of ribulose bisphosphate carboxylase/oxygenase (RuBisCO) large chains: In silico study. Physiology & Molecular Biol Plants 2005; 11 (2): 225.

  • 37. P Shil, SH Sanghvi, PB Vidyasagar, KP Mishra.  Enhancement of radiation cytotoxicity in murine cancer cells by electroporation: in vitro and in vivo studies.  J  Environmental Pathology, Toxicology and Oncology2005;  24(4):291-8.

  • 38. P Shil, PB Vidyasagar, SH Sanghvi, KP Mishra. Electro pulse mediated enhancement of radiation response of murine cancer cells. Ind. J Radiation Res. 2004; 1 (2): 107.

 

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